APRT

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, APRT protein abundance is significantly associated with the RNA expression of many other genes, with 12,207 significant associations in total. GBM shows the largest number of these associations.

The most reproducible APRT-associated genes across cancer lineages are CHMP1A, ZNF286B, and TRADD. Each is linked with APRT in more than 4 cancer types. Because this analysis shows association rather than direction, both APRT-to-partner and partner-to-APRT results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (APRT→partner) and Y-score (partner→APRT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCHMP1A →+0.602+0.426<.001<.00135
BRCAZNF286B →-0.628-0.401<.001.00135
LSCCTRADD →+0.516+0.400<.001<.00134
UCECHSF4 →+0.848+0.292.001.00234
GBMFBXO5 →-0.805-0.530<.001<.00134
LUADE2F3 →-0.594-0.382<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,207 associations by consensus.

Exploration