APLNR

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, APLNR mutation is significantly associated with the RNA expression of many other genes, with 2,878 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible APLNR-associated genes across cancer lineages are FANCG, MRPL37, and TCF3. Each is linked with APLNR in more than 3 cancer types. Because this analysis shows association rather than direction, both APLNR-to-partner and partner-to-APLNR results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FANCG grouped by APLNR-low versus APLNR-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (APLNR→partner) and Y-score (partner→APLNR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFANCG →+0.441+2.021.003.00134
UCECMRPL37 →+0.453+2.711.001<.00134
UCECTCF3 →+0.454+1.684.003.00734
SKCMHINFP →+0.292+3.179.001<.00134
SKCMUQCRH →+0.422+2.623<.001<.00134
SKCMNR2C2AP →+0.368+2.078<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,878 associations by consensus.

FANCG by APLNR expression — UCEC

Box plot of FANCG in APLNR-low vs APLNR-high samples in UCEC.

Explore this box plot interactively →

Exploration