APBB3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, APBB3 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,906 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible APBB3-associated GO terms across cancer lineages are Protein polyglycylation, Calcium-independent cell-matrix adhesion, and Target-directed miRNA degradation. Each is linked with APBB3 in more than 17 cancer types. Because this analysis shows association rather than direction, both APBB3-to-partner and partner-to-APBB3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein polyglycylation grouped by APBB3-low versus APBB3-high in LUNG_NSCLC_LUSC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (APBB3→partner) and Y-score (partner→APBB3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUSCProtein polyglycylation →+1.254+0.982.001.003318
URINARY_TRACTCalcium-independent cell-matrix adhesion →+0.236+1.429<.001.002316
OVARYTarget-directed miRNA degradation →+0.115+0.941<.001.001216
UPPER_AERODIGESTIVE_TRACTFlagellated sperm motility →-0.137-1.690<.001<.001315
UPPER_AERODIGESTIVE_TRACTNegative regulation of syncytium formation by plasma membrane fusion →+0.128+1.322<.001.001315
UPPER_AERODIGESTIVE_TRACTSperm motility →-0.137-1.690<.001<.001315
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,906 associations by consensus.

Protein polyglycylation by APBB3 expression — LUNG_NSCLC_LUSC

Box plot of Protein polyglycylation in APBB3-low vs APBB3-high samples in LUNG_NSCLC_LUSC.

Explore this box plot interactively →

Exploration