AP5B1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AP5B1 protein abundance is significantly associated with the RNA expression of many other genes, with 9,013 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible AP5B1-associated genes across cancer lineages are C1QC, SIGLEC1, and C1QA. Each is linked with AP5B1 in more than 5 cancer types. Because this analysis shows association rather than direction, both AP5B1-to-partner and partner-to-AP5B1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, AP5B1 versus C1QC in LUAD, with a Pearson correlation of 0.41.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AP5B1→partner) and Y-score (partner→AP5B1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADC1QC →+0.947+0.177<.001<.00136
LUADSIGLEC1 →+0.962+0.178<.001<.00135
BRCAC1QA →+0.892+0.200.002.00135
LSCCOSCAR →+0.810+0.252<.001<.00134
GBMMS4A4E →+0.900+0.244<.001<.00134
PDACNCF2 →+0.591+0.286.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,013 associations by consensus.

AP5B1 vs C1QC — LUAD

Per-sample scatter of AP5B1 vs C1QC in LUAD (Pearson r = 0.41).

Explore this scatter interactively →

Exploration