AP3M2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AP3M2 mutation is significantly associated with the total protein of many other genes, with 16 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible AP3M2-associated genes across cancer lineages are p90 RSK, 14-3-3_beta, and eIF4E. Each is linked with AP3M2 in more than 1 cancer types. Because this analysis shows association rather than direction, both AP3M2-to-partner and partner-to-AP3M2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, p90 RSK grouped by AP3M2-low versus AP3M2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AP3M2→partner) and Y-score (partner→AP3M2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECp90 RSK →+0.147+1.598.033.01132
UCEC14-3-3_beta →-0.105-3.295.003.00931
UCECeIF4E →+0.195+2.321.010.00131
UCECA-Raf_pS299 →-0.098-2.115.023.01731
UCECFibronectin →-0.258-1.690.029.04231
UCECJNK2 →+0.161+1.763.024.04831
Each partner links to its Q-omics profile. Showing the 6 strongest of 16 associations by consensus.

p90 RSK by AP3M2 expression — UCEC

Box plot of p90 RSK in AP3M2-low vs AP3M2-high samples in UCEC.

Explore this box plot interactively →

Exploration