ANTXRL

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ANTXRL mutation is significantly associated with the RNA expression of many other genes, with 20 significant associations in total. CNS shows the largest number of these associations.

The most reproducible ANTXRL-associated genes across cancer lineages are DEFB124, TFAP2D, and LGALS13. Each is linked with ANTXRL in more than 1 cancer types. Because this analysis shows association rather than direction, both ANTXRL-to-partner and partner-to-ANTXRL results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DEFB124 grouped by ANTXRL-low versus ANTXRL-high in LUNG_NSCLC_LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ANTXRL→partner) and Y-score (partner→ANTXRL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUSCDEFB124 →+0.187+4.108<.001.00531
SOFT_TISSUETFAP2D →+0.022+4.930<.001.00831
OESOPHAGUSLGALS13 →+0.073+4.906<.001.00631
OESOPHAGUSFSCB →+0.046+4.906<.001.00631
LARGE_INTESTINEGCM2 →+0.080+3.920<.001.00531
LARGE_INTESTINEC1QTNF7 →+0.156+4.108<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 20 associations by consensus.

DEFB124 by ANTXRL expression — LUNG_NSCLC_LUSC

Box plot of DEFB124 in ANTXRL-low vs ANTXRL-high samples in LUNG_NSCLC_LUSC.

Explore this box plot interactively →

Exploration