ANGPTL4

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ANGPTL4 mutation is significantly associated with the RNA expression of many other genes, with 7 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ANGPTL4-associated genes across cancer lineages are LMNTD1, UTF1, and OR10W1. Each is linked with ANGPTL4 in more than 1 cancer types. Because this analysis shows association rather than direction, both ANGPTL4-to-partner and partner-to-ANGPTL4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LMNTD1 grouped by ANGPTL4-low versus ANGPTL4-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ANGPTL4→partner) and Y-score (partner→ANGPTL4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINELMNTD1 →+0.186+2.969<.001.00731
LARGE_INTESTINEUTF1 →+0.015+3.217<.001.00631
LARGE_INTESTINEOR10W1 →+0.014+3.562<.001.00231
LARGE_INTESTINELRRC3C →+0.291+3.099<.001.00431
LARGE_INTESTINEMAGEB1 →+0.159+2.878.002.00931
LARGE_INTESTINECHAT →+0.022+3.103.007.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

LMNTD1 by ANGPTL4 expression — LARGE_INTESTINE

Box plot of LMNTD1 in ANGPTL4-low vs ANGPTL4-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration