ANGPTL1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ANGPTL1 mutation is significantly associated with the RNA expression of many other genes, with 1,586 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ANGPTL1-associated genes across cancer lineages are GZMB, IFNG, and RWDD1. Each is linked with ANGPTL1 in more than 1 cancer types. Because this analysis shows association rather than direction, both ANGPTL1-to-partner and partner-to-ANGPTL1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GZMB grouped by ANGPTL1-low versus ANGPTL1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ANGPTL1→partner) and Y-score (partner→ANGPTL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECGZMB →+1.001+3.584.004.00232
UCECIFNG →+0.738+3.111<.001<.00132
UCECRWDD1 →+0.469+2.423<.001.00132
UCECCOX7A2 →+0.327+2.287.006.00532
UCECRTN4IP1 →+0.403+2.447<.001.00132
UCECMETTL5 →+0.440+1.947<.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,586 associations by consensus.

GZMB by ANGPTL1 expression — UCEC

Box plot of GZMB in ANGPTL1-low vs ANGPTL1-high samples in UCEC.

Explore this box plot interactively →

Exploration