AMFR

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AMFR mutation is significantly associated with the total protein of many other genes, with 39 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible AMFR-associated genes across cancer lineages are FOXO3a_pS318_S321, Notch1, and p38-MAPK. Each is linked with AMFR in more than 1 cancer types. Because this analysis shows association rather than direction, both AMFR-to-partner and partner-to-AMFR results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FOXO3a_pS318_S321 grouped by AMFR-low versus AMFR-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AMFR→partner) and Y-score (partner→AMFR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFOXO3a_pS318_S321 →-0.110-1.916.008.00432
UCECNotch1 →+0.191+2.515<.001<.00132
UCECp38-MAPK →-0.149-1.394.006.04332
UCECPKC-b-II_pS660 →-0.245-1.584.008.00932
UCECCaspase-8 →-0.251-4.221.002<.00132
UCECc-Met_pY1235 →+0.076+1.512.002.01732
Each partner links to its Q-omics profile. Showing the 6 strongest of 39 associations by consensus.

FOXO3a_pS318_S321 by AMFR expression — UCEC

Box plot of FOXO3a_pS318_S321 in AMFR-low vs AMFR-high samples in UCEC.

Explore this box plot interactively →

Exploration