AMFR

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, AMFR RNA expression is significantly associated with the go_rna of many other GO terms, with 5,093 significant associations in total. BONE shows the largest number of these associations.

The most reproducible AMFR-associated GO terms across cancer lineages are Regulation of Golgi inheritance, Regulation of hypoxia-induced intrinsic apoptotic signaling pathway, and Negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway. Each is linked with AMFR in more than 12 cancer types. Because this analysis shows association rather than direction, both AMFR-to-partner and partner-to-AMFR results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of Golgi inheritance grouped by AMFR-low versus AMFR-high in UPPER_AERODIGESTIVE_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (AMFR→partner) and Y-score (partner→AMFR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UPPER_AERODIGESTIVE_TRACTRegulation of Golgi inheritance →+0.156+0.854.001<.001313
BONERegulation of hypoxia-induced intrinsic apoptotic signaling pathway →+0.153+1.469<.001.001311
BONENegative regulation of hypoxia-induced intrinsic apoptotic signaling pathway →+0.153+1.469<.001.001311
BONEVacuole organization →+0.064+1.586<.001<.001311
LARGE_INTESTINEERBB3 signaling pathway →+0.182+0.677<.001<.001311
LARGE_INTESTINEERBB2-ERBB3 signaling pathway →+0.182+0.677<.001<.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,093 associations by consensus.

Regulation of Golgi inheritance by AMFR expression — UPPER_AERODIGESTIVE_TRACT

Box plot of Regulation of Golgi inheritance in AMFR-low vs AMFR-high samples in UPPER_AERODIGESTIVE_TRACT.

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Exploration