AMER1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AMER1 mutation is significantly associated with the RNA expression of many other genes, with 4,327 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible AMER1-associated genes across cancer lineages are FAM136A, RPS19BP1, and MZT1. Each is linked with AMER1 in more than 4 cancer types. Because this analysis shows association rather than direction, both AMER1-to-partner and partner-to-AMER1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AMER1→partner) and Y-score (partner→AMER1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CESCFAM136A →+0.432+2.528.006.00925
UCECRPS19BP1 →+0.361+2.032<.001<.00134
UCECMZT1 →+0.475+1.510<.001<.00134
UCECR3HCC1 →+0.424+1.979<.001<.00134
UCECHSPA9 →+0.380+1.280<.001<.00134
UCECMRPL19 →+0.314+1.544.004.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,327 associations by consensus.

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