ALKBH5

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ALKBH5 mutation is significantly associated with the RNA expression of many other genes, with 592 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ALKBH5-associated genes across cancer lineages are RN7SL147P, OR12D2, and SEC63P2. Each is linked with ALKBH5 in more than 2 cancer types. Because this analysis shows association rather than direction, both ALKBH5-to-partner and partner-to-ALKBH5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL147P grouped by ALKBH5-low versus ALKBH5-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ALKBH5→partner) and Y-score (partner→ALKBH5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADRN7SL147P →+0.585+3.870<.001.00633
CESCOR12D2 →+0.039+5.418.005.00532
UCECSEC63P2 →+0.097+2.515<.001.00532
UCECRNA5SP419 →+0.629+2.398.001.00732
UCECRNA5SP410 →+0.570+2.566.003.00232
UCECRNU6-988P →+0.403+2.252.006.00732
Each partner links to its Q-omics profile. Showing the 6 strongest of 592 associations by consensus.

RN7SL147P by ALKBH5 expression — COAD

Box plot of RN7SL147P in ALKBH5-low vs ALKBH5-high samples in COAD.

Explore this box plot interactively →

Exploration