ALKAL1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ALKAL1 RNA expression is significantly associated with the go_rna of many other GO terms, with 743 significant associations in total. URINARY_TRACT shows the largest number of these associations.

The most reproducible ALKAL1-associated GO terms across cancer lineages are Regulation of spindle assembly, Nuclear membrane reassembly, and Response to indole-3-methanol. Each is linked with ALKAL1 in more than 4 cancer types. Because this analysis shows association rather than direction, both ALKAL1-to-partner and partner-to-ALKAL1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (ALKAL1→partner) and Y-score (partner→ALKAL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYRegulation of spindle assembly →+0.067+0.375.001.00225
URINARY_TRACTNuclear membrane reassembly →+0.083+0.454<.001.00525
URINARY_TRACTResponse to indole-3-methanol →+0.146+0.442.001.00734
URINARY_TRACTCellular response to indole-3-methanol →+0.117+0.347.004.00734
PANCREASPositive regulation of matrix metallopeptidase secretion →-0.210-0.900.002.00725
BLOOD_LeukemiaPositive regulation of pattern recognition receptor signaling pathway →+0.025+0.443.001.00734
Each partner links to its Q-omics profile. Showing the 6 strongest of 743 associations by consensus.

Exploration