ALG5

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ALG5 mutation is significantly associated with the total protein of many other genes, with 27 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ALG5-associated genes across cancer lineages are PCNA, Caspase-7-cleavedD198, and FoxM1. Each is linked with ALG5 in more than 1 cancer types. Because this analysis shows association rather than direction, both ALG5-to-partner and partner-to-ALG5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PCNA grouped by ALG5-low versus ALG5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ALG5→partner) and Y-score (partner→ALG5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPCNA →+0.238+2.999.009.03532
UCECCaspase-7-cleavedD198 →+0.502+3.019.046.01932
UCECFoxM1 →+0.260+2.222.018.01131
UCECGATA6 →-0.164-2.108.015.01831
UCECHER3 →+0.317+1.713.006.02731
UCECACVRL1 →-0.151-2.446.008.01831
Each partner links to its Q-omics profile. Showing the 6 strongest of 27 associations by consensus.

PCNA by ALG5 expression — UCEC

Box plot of PCNA in ALG5-low vs ALG5-high samples in UCEC.

Explore this box plot interactively →

Exploration