AGTRAP

Across TCGA patient cohorts, AGTRAP mutation is significantly associated with the RNA expression of many other genes, with 81 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible AGTRAP-associated genes across cancer lineages are PSMB7P1, SNRPGP6, and RPL17P19. Each is linked with AGTRAP in more than 2 cancer types. Because this analysis shows association rather than direction, both AGTRAP-to-partner and partner-to-AGTRAP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PSMB7P1 grouped by AGTRAP-low versus AGTRAP-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AGTRAP→partner) and Y-score (partner→AGTRAP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BLCA	PSMB7P1 →	+0.104	+7.640	<.001	.009	3	3
LUSC	SNRPGP6 →	+0.903	+5.211	<.001	.007	3	2
LUSC	RPL17P19 →	+0.198	+5.548	<.001	.004	3	2
LUSC	RNU6-1018P →	+0.445	+5.151	<.001	.007	3	2
COAD	OR52Z1 →	+0.106	+6.917	<.001	<.001	3	2
HNSC	TTTY2B →	+0.009	+7.954	<.001	.008	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 81 associations by consensus.

PSMB7P1 by AGTRAP expression — BLCA

Explore this box plot interactively →