AGTRAP

Across TCGA cell cohorts, AGTRAP RNA expression is significantly associated with the go_rna of many other GO terms, with 4,033 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible AGTRAP-associated GO terms across cancer lineages are Regulation of entry of bacterium into host cell, Carbohydrate derivative catabolic process, and Skeletal muscle tissue regeneration. Each is linked with AGTRAP in more than 10 cancer types. Because this analysis shows association rather than direction, both AGTRAP-to-partner and partner-to-AGTRAP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of entry of bacterium into host cell grouped by AGTRAP-low versus AGTRAP-high in LUNG_NSCLC_LUSC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (AGTRAP→partner) and Y-score (partner→AGTRAP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUSC	Regulation of entry of bacterium into host cell →	+0.289	+1.614	.002	.003	3	11
LUNG_SCLC	Carbohydrate derivative catabolic process →	+0.104	+1.529	<.001	<.001	3	10
LUNG_SCLC	Skeletal muscle tissue regeneration →	+0.160	+1.235	.001	.001	3	10
STOMACH	Intracellular zinc ion homeostasis →	+0.136	+1.261	<.001	<.001	3	10
OVARY	Biological process involved in symbiotic interaction →	+0.085	+0.629	<.001	.002	3	10
SOFT_TISSUE	Negative regulation of cytokine production →	+0.039	+0.668	.002	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,033 associations by consensus.

Regulation of entry of bacterium into host cell by AGTRAP expression — LUNG_NSCLC_LUSC

Explore this box plot interactively →