AGPAT3

Across TCGA cell cohorts, AGPAT3 mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible AGPAT3-associated genes across cancer lineages are ECE2 and SCN11A. Each is linked with AGPAT3 in more than 1 cancer types. Because this analysis shows association rather than direction, both AGPAT3-to-partner and partner-to-AGPAT3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ECE2 grouped by AGPAT3-low versus AGPAT3-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AGPAT3→partner) and Y-score (partner→AGPAT3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	ECE2 →	+0.360	+4.054	<.001	.004	3	1
LARGE_INTESTINE	SCN11A →	+0.160	+3.772	<.001	.007	2	1

Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

ECE2 by AGPAT3 expression — LARGE_INTESTINE

Explore this box plot interactively →