AGL

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AGL RNA expression is significantly associated with the protein abundance of many other proteins, with 11,251 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible AGL-associated proteins across cancer lineages are PPIB, RIN3, and SEC24A. Each is linked with AGL in more than 3 cancer types. Because this analysis shows association rather than direction, both AGL-to-partner and partner-to-AGL results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, AGL versus PPIB in GBM, with a Pearson correlation of -0.45.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (AGL→partner) and Y-score (partner→AGL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPPIB →-0.471-0.710<.001<.00134
GBMRIN3 →-0.345-0.371<.001.00334
HNSCSEC24A →-0.295-0.568<.001<.00134
HNSCHDLBP →-0.249-0.657<.001<.00134
HNSCHSPA13 →-0.428-0.538<.001.00134
LSCCPLEKHO2 →-0.282-0.629<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,251 associations by consensus.

AGL vs PPIB — GBM

Per-sample scatter of AGL vs PPIB in GBM (Pearson r = -0.45).

Explore this scatter interactively →

Exploration