AGL

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AGL protein abundance is significantly associated with the RNA expression of many other genes, with 10,250 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible AGL-associated genes across cancer lineages are DBT, FAM189A2, and ZMYND12. Each is linked with AGL in more than 5 cancer types. Because this analysis shows association rather than direction, both AGL-to-partner and partner-to-AGL results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, AGL versus DBT in LSCC, with a Pearson correlation of 0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AGL→partner) and Y-score (partner→AGL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCDBT →+0.419+0.306<.001<.00136
UCECFAM189A2 →+1.676+0.303<.001<.00135
LUADZMYND12 →+0.715+0.356<.001<.00135
BRCAERBB4 →+1.557+0.478<.001<.00135
BRCAHJURP →-0.975-0.471<.001<.00135
UCECC16orf89 →+1.495+0.184.001.00335
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,250 associations by consensus.

AGL vs DBT — LSCC

Per-sample scatter of AGL vs DBT in LSCC (Pearson r = 0.37).

Explore this scatter interactively →

Exploration