AGBL5-IT1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, AGBL5-IT1 RNA differs between tumor and matched normal tissue in 13 of 18 cancer types tested, making tumor–normal expression one of AGBL5-IT1’s most consistent transcriptional readouts.

The strongest signal is observed in bladder urothelial carcinoma (BLCA), where AGBL5-IT1 RNA is repressed in tumor relative to normal tissue. In most cancer types AGBL5-IT1 is over-expressed in tumor, although a few such as BLCA and UCEC show the opposite, repressed pattern.

BLCA, UCEC, and BRCA are the cancer types where AGBL5-IT1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in AGBL5-IT1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
BLCAMaleIV−2.187.0018view →
UCECAllIII,IV−0.934<.0018view →
BRCAAllIII,IV−0.719<.0016view →
KICHAllAll−0.618<.0016view →
KIRCAllAll−0.247.0026view →
THCAMaleIV−1.256.0155view →
LIHCAllII,III,IV+0.483.0035view →
KIRPAllII,III,IV−0.706.0034view →
COADAllAll−0.394.0034view →
CHOLAllAll+1.344<.0013view →
LUADAllAll−0.483<.0013view →
LUSCAllAll−0.461<.0013view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 13 lineages.

Exploration