AGBL3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AGBL3 mutation is significantly associated with the total protein of many other genes, with 23 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible AGBL3-associated genes across cancer lineages are S6_pS240_S244, ATM, and 4E-BP1. Each is linked with AGBL3 in more than 1 cancer types. Because this analysis shows association rather than direction, both AGBL3-to-partner and partner-to-AGBL3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, S6_pS240_S244 grouped by AGBL3-low versus AGBL3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AGBL3→partner) and Y-score (partner→AGBL3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECS6_pS240_S244 →+0.298+2.335.034.01832
UCECATM →-0.343-1.440.029.02432
UCEC4E-BP1 →+0.214+3.169.023.01832
UCEC14-3-3_beta →-0.076-3.432.029.00531
UCECERK2 →+0.170+2.321.010.00531
UCECFibronectin →-0.317-2.492.005.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 23 associations by consensus.

S6_pS240_S244 by AGBL3 expression — UCEC

Box plot of S6_pS240_S244 in AGBL3-low vs AGBL3-high samples in UCEC.

Explore this box plot interactively →

Exploration