Across TCGA patient cohorts, AGAP9 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,154 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible AGAP9-associated GO terms across cancer lineages are Co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway, Negative regulation of gene expression, epigenetic, and Positive regulation of double-strand break repair via homologous recombination. Each is linked with AGAP9 in more than 29 cancer types. Because this analysis shows association rather than direction, both AGAP9-to-partner and partner-to-AGAP9 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (AGAP9→partner) and Y-score (partner→AGAP9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SCLC	Co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway →	+0.121	+0.630	<.001	<.001	3	30
SCLC	Negative regulation of gene expression, epigenetic →	+0.119	+0.928	<.001	<.001	3	29
SCLC	Positive regulation of double-strand break repair via homologous recombination →	+0.096	+0.876	.001	<.001	3	29
SCLC	Positive regulation of double-strand break repair →	+0.067	+0.720	.005	<.001	2	29
SCLC	Co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway →	+0.113	+0.704	<.001	<.001	3	28
SCLC	Peptidyl-lysine acetylation →	+0.078	+0.599	<.001	<.001	3	28

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,154 associations by consensus.

Exploration

AGAP9 survival (RNA) · tumor vs normal (RNA) · all AGAP9 data types