AGAP6

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AGAP6 mutation is significantly associated with the RNA expression of many other genes, with 3,116 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible AGAP6-associated genes across cancer lineages are MIR3691, MIR7-3, and LINC02136. Each is linked with AGAP6 in more than 1 cancer types. Because this analysis shows association rather than direction, both AGAP6-to-partner and partner-to-AGAP6 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AGAP6→partner) and Y-score (partner→AGAP6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CESCMIR3691 →+0.554+5.669<.001.00332
CESCMIR7-3 →+0.370+6.342<.001.00132
LUADLINC02136 →+0.480+4.426<.001.00632
SKCMRN7SL299P →+0.077+4.147<.001.00832
UCECUSP9YP2 →+0.011+4.365<.001.00232
UCECRNA5SP415 →+0.410+2.167<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,116 associations by consensus.

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