AFG3L2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, AFG3L2 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,565 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible AFG3L2-associated GO terms across cancer lineages are Regulation of mitochondrial DNA replication, RNA (guanine-N7)-methylation, and Mitotic nuclear division. Each is linked with AFG3L2 in more than 16 cancer types. Because this analysis shows association rather than direction, both AFG3L2-to-partner and partner-to-AFG3L2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of mitochondrial DNA replication grouped by AFG3L2-low versus AFG3L2-high in LIVER.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (AFG3L2→partner) and Y-score (partner→AFG3L2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LIVERRegulation of mitochondrial DNA replication →+0.120+0.911.004.006317
BONERNA (guanine-N7)-methylation →+0.145+0.921<.001<.001317
BONEMitotic nuclear division →+0.103+0.655.008.003314
BONERegulation of centrosome cycle →+0.101+0.758.003.003313
LIVERMitochondrial protein quality control →+0.238+0.826<.001.001313
BONEEstablishment of spindle localization →+0.101+1.014.009<.001313
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,565 associations by consensus.

Regulation of mitochondrial DNA replication by AFG3L2 expression — LIVER

Box plot of Regulation of mitochondrial DNA replication in AFG3L2-low vs AFG3L2-high samples in LIVER.

Explore this box plot interactively →

Exploration