AFG1L

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, AFG1L RNA expression is significantly associated with the go_rna of many other GO terms, with 3,206 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible AFG1L-associated GO terms across cancer lineages are 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process, Glutaminyl-tRNAGln biosynthesis via transamidation, and Quinone biosynthetic process. Each is linked with AFG1L in more than 11 cancer types. Because this analysis shows association rather than direction, both AFG1L-to-partner and partner-to-AFG1L results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process grouped by AFG1L-low versus AFG1L-high in SKIN.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (AFG1L→partner) and Y-score (partner→AFG1L) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKIN1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process →+0.092+0.480<.001<.001312
UPPER_AERODIGESTIVE_TRACTGlutaminyl-tRNAGln biosynthesis via transamidation →+0.086+0.687<.001<.001311
LARGE_INTESTINEQuinone biosynthetic process →+0.094+0.548<.001.003311
LARGE_INTESTINEUbiquinone biosynthetic process →+0.094+0.548<.001.003311
LARGE_INTESTINEUbiquinone metabolic process →+0.093+0.603<.001<.00139
BREASTRegulation of mitochondrial gene expression →+0.071+0.503.004.00238
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,206 associations by consensus.

1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process by AFG1L expression — SKIN

Box plot of 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process in AFG1L-low vs AFG1L-high samples in SKIN.

Explore this box plot interactively →

Exploration