ADPGK

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ADPGK mutation is significantly associated with the RNA expression of many other genes, with 1,487 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ADPGK-associated genes across cancer lineages are RNU6-947P, SNORD113-1, and MIR328. Each is linked with ADPGK in more than 1 cancer types. Because this analysis shows association rather than direction, both ADPGK-to-partner and partner-to-ADPGK results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-947P grouped by ADPGK-low versus ADPGK-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ADPGK→partner) and Y-score (partner→ADPGK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMRNU6-947P →+0.258+7.816<.001.00832
CESCSNORD113-1 →+0.329+5.837<.001.00132
BRCAMIR328 →+0.463+5.646<.001.00432
UCECRNA5SP405 →+0.234+2.845<.001.00932
COADMIR629 →+0.277+4.807.005.00432
UCECRN7SL354P →+0.241+1.736<.001.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,487 associations by consensus.

RNU6-947P by ADPGK expression — SKCM

Box plot of RNU6-947P in ADPGK-low vs ADPGK-high samples in SKCM.

Explore this box plot interactively →

Exploration