ADD3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ADD3 mutation is significantly associated with the RNA expression of many other genes, with 1,558 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ADD3-associated genes across cancer lineages are RPL3, DESI1, and METTL4. Each is linked with ADD3 in more than 1 cancer types. Because this analysis shows association rather than direction, both ADD3-to-partner and partner-to-ADD3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RPL3 grouped by ADD3-low versus ADD3-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ADD3→partner) and Y-score (partner→ADD3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINERPL3 →+0.397+3.389.009.00132
LARGE_INTESTINEDESI1 →+0.594+3.459<.001<.00132
LARGE_INTESTINEMETTL4 →+0.719+2.652<.001.00132
LARGE_INTESTINETBC1D12 →+0.588+2.850.007<.00132
LARGE_INTESTINEHSPA9 →+0.506+2.158.003.00432
LARGE_INTESTINEMXI1 →+0.960+3.459<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,558 associations by consensus.

RPL3 by ADD3 expression — LARGE_INTESTINE

Box plot of RPL3 in ADD3-low vs ADD3-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration