ACTN3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ACTN3 mutation is significantly associated with the total protein of many other genes, with 47 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ACTN3-associated genes across cancer lineages are 4E-BP1, EGFR_pY1068, and eIF4G. Each is linked with ACTN3 in more than 2 cancer types. Because this analysis shows association rather than direction, both ACTN3-to-partner and partner-to-ACTN3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, 4E-BP1 grouped by ACTN3-low versus ACTN3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ACTN3→partner) and Y-score (partner→ACTN3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCEC4E-BP1 →+0.334+3.029<.001<.00133
UCECEGFR_pY1068 →-0.201-1.502.010.02732
UCECeIF4G →+0.202+1.874.038.04932
UCECAcetyl-a-Tubulin-Lys40 →+0.416+1.584.009.00532
UCECNotch1 →+0.154+1.836<.001.00132
UCECSrc_pY527 →-0.323-2.222.017.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 47 associations by consensus.

4E-BP1 by ACTN3 expression — UCEC

Box plot of 4E-BP1 in ACTN3-low vs ACTN3-high samples in UCEC.

Explore this box plot interactively →

Exploration