ACD

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ACD RNA expression is significantly associated with the go_rna of many other GO terms, with 4,517 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible ACD-associated GO terms across cancer lineages are Regulation of establishment of protein localization to chromosome, Regulation of establishment of protein localization to telomere, and Cell cycle DNA replication initiation. Each is linked with ACD in more than 16 cancer types. Because this analysis shows association rather than direction, both ACD-to-partner and partner-to-ACD results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of establishment of protein localization to chromosome grouped by ACD-low versus ACD-high in BREAST.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (ACD→partner) and Y-score (partner→ACD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BREASTRegulation of establishment of protein localization to chromosome →+0.153+1.136<.001<.001317
OVARYRegulation of establishment of protein localization to telomere →+0.133+1.217<.001<.001317
BONECell cycle DNA replication initiation →+0.220+1.243.005<.001316
BONENuclear cell cycle DNA replication initiation →+0.220+1.243.005<.001316
BONEMitotic DNA replication initiation →+0.220+1.243.005<.001316
BONETelomere maintenance in response to DNA damage →+0.150+1.138<.001<.001316
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,517 associations by consensus.

Regulation of establishment of protein localization to chromosome by ACD expression — BREAST

Box plot of Regulation of establishment of protein localization to chromosome in ACD-low vs ACD-high samples in BREAST.

Explore this box plot interactively →

Exploration