ACD

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ACD mutation is significantly associated with the RNA expression of many other genes, with 243 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ACD-associated genes across cancer lineages are GPR101, GZMK, and C20orf173. Each is linked with ACD in more than 1 cancer types. Because this analysis shows association rather than direction, both ACD-to-partner and partner-to-ACD results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GPR101 grouped by ACD-low versus ACD-high in OESOPHAGUS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ACD→partner) and Y-score (partner→ACD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSGPR101 →+0.070+4.906<.001.00631
BLOOD_LeukemiaGZMK →+0.412+4.037.008.00431
BLOOD_LeukemiaC20orf173 →+0.105+4.133<.001.00331
BLOOD_LeukemiaHHLA1 →+0.009+3.551<.001.00931
BLOOD_LeukemiaBTBD16 →+0.107+3.959<.001.00531
BLOOD_LeukemiaDCLK3 →+0.271+3.769<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 243 associations by consensus.

GPR101 by ACD expression — OESOPHAGUS

Box plot of GPR101 in ACD-low vs ACD-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration