ABR

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ABR mutation is significantly associated with the total protein of many other genes, with 49 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ABR-associated genes across cancer lineages are Caspase-7-cleavedD198, eEF2, and Rad50. Each is linked with ABR in more than 2 cancer types. Because this analysis shows association rather than direction, both ABR-to-partner and partner-to-ABR results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by ABR-low versus ABR-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ABR→partner) and Y-score (partner→ABR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADCaspase-7-cleavedD198 →+1.494+2.815<.001.03633
UCECeEF2 →+0.289+1.678.006.01933
UCECRad50 →-0.246-1.986<.001.00833
BRCANotch1 →+0.196+2.814.041.03732
COADGAPDH →+0.650+2.815.019.03632
COADCyclin-E1 →+0.279+2.815.043.03632
Each partner links to its Q-omics profile. Showing the 6 strongest of 49 associations by consensus.

Caspase-7-cleavedD198 by ABR expression — COAD

Box plot of Caspase-7-cleavedD198 in ABR-low vs ABR-high samples in COAD.

Explore this box plot interactively →

Exploration