ABITRAM

Across TCGA cell cohorts, ABITRAM RNA expression is significantly associated with the go_rna of many other GO terms, with 3,119 significant associations in total. BONE shows the largest number of these associations.

The most reproducible ABITRAM-associated GO terms across cancer lineages are Proteasome regulatory particle assembly, RNA export from nucleus, and mRNA export from nucleus. Each is linked with ABITRAM in more than 12 cancer types. Because this analysis shows association rather than direction, both ABITRAM-to-partner and partner-to-ABITRAM results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Proteasome regulatory particle assembly grouped by ABITRAM-low versus ABITRAM-high in OVARY.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (ABITRAM→partner) and Y-score (partner→ABITRAM) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OVARY	Proteasome regulatory particle assembly →	+0.168	+1.172	<.001	<.001	3	13
BONE	RNA export from nucleus →	+0.092	+0.455	.001	.003	3	11
SKIN	mRNA export from nucleus →	+0.078	+0.731	.001	.001	3	10
BLOOD_Lymphoma	Establishment of RNA localization →	+0.071	+0.716	.002	<.001	3	10
BLOOD_Lymphoma	Protein branched polyubiquitination →	+0.076	+0.838	<.001	<.001	3	9
OVARY	Spliceosomal complex assembly →	+0.080	+0.842	.001	.001	2	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,119 associations by consensus.

Proteasome regulatory particle assembly by ABITRAM expression — OVARY

Explore this box plot interactively →