ABI3

Across TCGA patient cohorts, ABI3 RNA expression is significantly associated with the RNA expression of many other genes, with 14,837 significant associations in total. UVM shows the largest number of these associations.

The most reproducible ABI3-associated genes across cancer lineages are MS4A6A, SELPLG, and FGL2. Each is linked with ABI3 in more than 33 cancer types. Because this analysis shows association rather than direction, both ABI3-to-partner and partner-to-ABI3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ABI3 versus MS4A6A in LAML, with a Pearson correlation of 0.67.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ABI3→partner) and Y-score (partner→ABI3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LAML	MS4A6A →	+2.942	+1.796	<.001	<.001	3	34
SCLC	SELPLG →	+2.507	+1.777	<.001	<.001	3	34
LAML	FGL2 →	+2.408	+1.791	<.001	<.001	3	34
SKCM	GIMAP4 →	+2.230	+1.876	<.001	<.001	3	34
SCLC	MYO1F →	+1.949	+2.449	<.001	<.001	3	34
SKCM	C1orf162 →	+1.880	+1.919	<.001	<.001	3	34

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,837 associations by consensus.

ABI3 vs MS4A6A — LAML

Explore this scatter interactively →