ABCB7

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ABCB7 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,946 significant associations in total. OVARY shows the largest number of these associations.

The most reproducible ABCB7-associated GO terms across cancer lineages are Transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery, Mitotic spindle elongation, and Negative regulation of maintenance of sister chromatid cohesion. Each is linked with ABCB7 in more than 13 cancer types. Because this analysis shows association rather than direction, both ABCB7-to-partner and partner-to-ABCB7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery grouped by ABCB7-low versus ABCB7-high in OVARY.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (ABCB7→partner) and Y-score (partner→ABCB7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYTranscription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery →+0.154+0.773<.001<.001314
LUNG_NSCLC_LUSCMitotic spindle elongation →+0.221+0.787.003.007312
OVARYNegative regulation of maintenance of sister chromatid cohesion →+0.090+0.531<.001.003312
OVARYNegative regulation of maintenance of mitotic sister chromatid cohesion →+0.090+0.531<.001.003312
LUNG_NSCLC_LUSCMitotic spindle midzone assembly →+0.221+0.787.003.007312
BLOOD_LeukemiaDosage compensation by inactivation of X chromosome →+0.089+0.560<.001<.001312
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,946 associations by consensus.

Transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery by ABCB7 expression — OVARY

Box plot of Transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery in ABCB7-low vs ABCB7-high samples in OVARY.

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Exploration