ABCB6

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ABCB6 mutation is significantly associated with the total protein of many other genes, with 30 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ABCB6-associated genes across cancer lineages are ATM, MEK1, and MSH2. Each is linked with ABCB6 in more than 3 cancer types. Because this analysis shows association rather than direction, both ABCB6-to-partner and partner-to-ABCB6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATM grouped by ABCB6-low versus ABCB6-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ABCB6→partner) and Y-score (partner→ABCB6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECATM →-0.531-2.794<.001.00234
UCECMEK1 →+0.438+3.169<.001<.00123
UCECMSH2 →-0.226-1.848.005.04932
COADCaspase-7-cleavedD198 →+1.193+2.815.005.03632
UCEC4E-BP1 →+0.322+2.392<.001<.00132
UCEC14-3-3_beta →-0.077-2.295.030.03331
Each partner links to its Q-omics profile. Showing the 6 strongest of 30 associations by consensus.

ATM by ABCB6 expression — UCEC

Box plot of ATM in ABCB6-low vs ABCB6-high samples in UCEC.

Explore this box plot interactively →

Exploration