ABCB5

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ABCB5 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,257 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible ABCB5-associated GO terms across cancer lineages are Lysosomal transport, Negative regulation of response to endoplasmic reticulum stress, and Regulation of proteasomal ubiquitin-dependent protein catabolic process. Each is linked with ABCB5 in more than 5 cancer types. Because this analysis shows association rather than direction, both ABCB5-to-partner and partner-to-ABCB5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Lysosomal transport grouped by ABCB5-low versus ABCB5-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (ABCB5→partner) and Y-score (partner→ABCB5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONELysosomal transport →+0.060+0.485.005.00336
UPPER_AERODIGESTIVE_TRACTNegative regulation of response to endoplasmic reticulum stress →+0.088+0.067<.001<.00135
UPPER_AERODIGESTIVE_TRACTRegulation of proteasomal ubiquitin-dependent protein catabolic process →+0.063+0.045<.001.00135
BONEPositive regulation of autophagy →+0.030+0.262.008.00735
BONENegative regulation of ferroptosis →+0.089+0.352<.001.00535
BONEPositive regulation of TOR signaling →+0.059+0.270<.001.00535
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,257 associations by consensus.

Lysosomal transport by ABCB5 expression — BONE

Box plot of Lysosomal transport in ABCB5-low vs ABCB5-high samples in BONE.

Explore this box plot interactively →

Exploration