ABCB4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ABCB4 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,508 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible ABCB4-associated GO terms across cancer lineages are Regulation of phospholipid translocation, Positive regulation of phospholipid translocation, and Retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Each is linked with ABCB4 in more than 8 cancer types. Because this analysis shows association rather than direction, both ABCB4-to-partner and partner-to-ABCB4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of phospholipid translocation grouped by ABCB4-low versus ABCB4-high in LARGE_INTESTINE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (ABCB4→partner) and Y-score (partner→ABCB4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINERegulation of phospholipid translocation →-0.238-0.611<.001.00139
LARGE_INTESTINEPositive regulation of phospholipid translocation →-0.238-0.611<.001.00139
SKINRetrograde vesicle-mediated transport, Golgi to endoplasmic reticulum →+0.064+1.721<.001.00636
SOFT_TISSUEOtolith morphogenesis →+0.852+0.546.001<.00136
BLOOD_LymphomaVesicle fusion →+0.032+0.891<.001<.00136
BLOOD_LeukemiaPeptidyl-threonine phosphorylation →+0.040+1.108.002<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,508 associations by consensus.

Regulation of phospholipid translocation by ABCB4 expression — LARGE_INTESTINE

Box plot of Regulation of phospholipid translocation in ABCB4-low vs ABCB4-high samples in LARGE_INTESTINE.

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Exploration