ABCA5

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ABCA5 mutation is significantly associated with the total protein of many other genes, with 46 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ABCA5-associated genes across cancer lineages are ASNS, Di-Ras3, and eIF4E. Each is linked with ABCA5 in more than 2 cancer types. Because this analysis shows association rather than direction, both ABCA5-to-partner and partner-to-ABCA5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ASNS grouped by ABCA5-low versus ABCA5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ABCA5→partner) and Y-score (partner→ABCA5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECASNS →+0.354+1.736<.001.00533
UCECDi-Ras3 →-0.117-2.489.003.00133
UCECeIF4E →+0.148+2.137.010<.00132
UCECERK2 →+0.149+1.353.004.01332
UCECNotch1 →+0.099+1.405.009.00932
UCECPDCD4 →-0.329-0.951.010.03732
Each partner links to its Q-omics profile. Showing the 6 strongest of 46 associations by consensus.

ASNS by ABCA5 expression — UCEC

Box plot of ASNS in ABCA5-low vs ABCA5-high samples in UCEC.

Explore this box plot interactively →

Exploration