ABCA10

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ABCA10 protein abundance is significantly associated with the RNA expression of many other genes, with 355 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible ABCA10-associated genes across cancer lineages are NCF4, CSF2RB, and GZMH. Each is linked with ABCA10 in more than 1 cancer types. Because this analysis shows association rather than direction, both ABCA10-to-partner and partner-to-ABCA10 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ABCA10 versus NCF4 in HNSC, with a Pearson correlation of -0.47.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ABCA10→partner) and Y-score (partner→ABCA10) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCNCF4 →-1.448-1.015.004.00431
HNSCCSF2RB →-1.904-0.896.001.00931
HNSCGZMH →-1.942-0.824<.001.00331
HNSCSLC17A9 →-1.103-0.728.002.00231
HNSCPPP1R16B →-1.617-1.036.002.00231
HNSCMPP6 →+0.960+1.010.005<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 355 associations by consensus.

ABCA10 vs NCF4 — HNSC

Per-sample scatter of ABCA10 vs NCF4 in HNSC (Pearson r = -0.47).

Explore this scatter interactively →

Exploration