AATK

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, AATK RNA expression is significantly associated with the go_rna of many other GO terms, with 4,726 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible AATK-associated GO terms across cancer lineages are Negative regulation of mRNA metabolic process, Regulation of syncytium formation by plasma membrane fusion, and Regulation of calcium ion transport into cytosol. Each is linked with AATK in more than 10 cancer types. Because this analysis shows association rather than direction, both AATK-to-partner and partner-to-AATK results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of mRNA metabolic process grouped by AATK-low versus AATK-high in LIVER.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (AATK→partner) and Y-score (partner→AATK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LIVERNegative regulation of mRNA metabolic process →+0.090+1.781<.001<.001311
BONERegulation of syncytium formation by plasma membrane fusion →+0.095+1.691.001<.001310
LIVERRegulation of calcium ion transport into cytosol →-0.270-1.592<.001<.00139
BONERegulation of myoblast fusion →+0.100+1.788.001<.00139
BONEPositive regulation of DNA repair →+0.102+1.495<.001<.00139
BONETranscription pausing by RNA polymerase II →+0.136+1.166.001.00239
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,726 associations by consensus.

Negative regulation of mRNA metabolic process by AATK expression — LIVER

Box plot of Negative regulation of mRNA metabolic process in AATK-low vs AATK-high samples in LIVER.

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Exploration