AATF

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, AATF RNA expression is significantly associated with the go_rna of many other GO terms, with 3,039 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible AATF-associated GO terms across cancer lineages are DNA replication initiation, Mitotic DNA replication checkpoint signaling, and Transcription by RNA polymerase I. Each is linked with AATF in more than 15 cancer types. Because this analysis shows association rather than direction, both AATF-to-partner and partner-to-AATF results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DNA replication initiation grouped by AATF-low versus AATF-high in BLOOD_Myeloma.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (AATF→partner) and Y-score (partner→AATF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_MyelomaDNA replication initiation →+0.145+0.705<.001<.001316
UPPER_AERODIGESTIVE_TRACTMitotic DNA replication checkpoint signaling →+0.154+0.703.002.005313
PANCREASTranscription by RNA polymerase I →+0.094+0.718<.001.001313
LUNG_NSCLC_LUSCDouble-strand break repair via break-induced replication →+0.179+0.800.006.004313
LUNG_NSCLC_LUSCMitotic spindle elongation →+0.246+0.807.002.001213
BLOOD_MyelomaSpindle elongation →+0.203+0.590<.001<.001312
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,039 associations by consensus.

DNA replication initiation by AATF expression — BLOOD_Myeloma

Box plot of DNA replication initiation in AATF-low vs AATF-high samples in BLOOD_Myeloma.

Explore this box plot interactively →

Exploration