Across TCGA cell cohorts, A3GALT2 mutation is significantly associated with the RNA expression of many other genes, with 313 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible A3GALT2-associated genes across cancer lineages are GYS2, ST8SIA3, and CST9L. Each is linked with A3GALT2 in more than 1 cancer types. Because this analysis shows association rather than direction, both A3GALT2-to-partner and partner-to-A3GALT2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (A3GALT2→partner) and Y-score (partner→A3GALT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OESOPHAGUS	GYS2 →	+0.086	+4.017	<.001	.007	3	1
OESOPHAGUS	ST8SIA3 →	+0.042	+4.392	.001	.003	3	1
SKIN	CST9L →	+0.039	+4.415	<.001	.007	3	1
SKIN	SLURP1 →	+0.726	+4.273	<.001	.006	3	1
LUNG_NSCLC_LUAD	IQCF3 →	+0.049	+5.228	<.001	.005	3	1
LUNG_NSCLC_LUAD	KRTAP19-3 →	+0.132	+5.228	<.001	.005	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 313 associations by consensus.

Exploration

A3GALT2 survival (RNA) · tumor vs normal (RNA) · all A3GALT2 data types