Rucaparib

response biomarkers — cross-omics
Drug responseDRUG → FUNCTION-MSCell linePF-01367338, AG-014699, AG-14447, AG-14699

Across CCLE and GDSC cell-line panels, response to Rucaparib is significantly associated with the protein-level pathway activity of multiple pathways, with BONE cell lines showing a particularly strong set of associations.

The most reproducible Rucaparib response-associated pathways across cancer lineages are Regulation of plasma membrane repair, Cellular extravasation, and rRNA 5'-end processing, each associated with drug response in up to 9 lineages. Since the analysis identifies associations rather than directional relationships, both response-to-biomarker and biomarker-to-response views are provided.

Each biomarker is linked to its corresponding Q-omics profile. The scatter plot shows the strongest observed association, Rucaparib response versus Regulation of plasma membrane repair protein-level pathway activity in BONE (Pearson r = -0.53).

Protein-level pathway activity biomarkers of Rucaparib response

Ranked by combined sampling and lineage consensus. X-score (response→biomarker) and Y-score (biomarker→response) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner pathwayX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONERegulation of plasma membrane repair →-0.261-0.596<.001<.00139
STOMACHCellular extravasation →-0.297-0.685.036.00539
URINARY_TRACTrRNA 5'-end processing →+1.842+0.392.003.02429
URINARY_TRACTEndonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) →+1.842+0.392.003.02429
LUNG_NSCLC_LUADEpithelial cell development →-0.154-0.492.001<.00138
SOFT_TISSUESingle fertilization →-0.248-0.387.001.00137
Each biomarker links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Rucaparib response vs Regulation of plasma membrane repair — BONE

Per-cell-line scatter of Rucaparib response vs Regulation of plasma membrane repair protein-level pathway activity in BONE.

Explore this scatter interactively →

Exploration