OF-1

response biomarkers — cross-omics
Drug responseDRUG → FUNCTION-RNACell line

Across CCLE and GDSC cell-line panels, response to OF-1 is significantly associated with the pathway activity of multiple pathways, with LIVER cell lines showing a particularly strong set of associations.

The most reproducible OF-1 response-associated pathways across cancer lineages are Regulation of plasminogen activation, Pyrimidine-containing compound transmembrane transport, and Purine nucleobase transport, each associated with drug response in up to 10 lineages. Since the analysis identifies associations rather than directional relationships, both response-to-biomarker and biomarker-to-response views are provided.

Each biomarker is linked to its corresponding Q-omics profile. The scatter plot shows the strongest observed association, OF-1 response versus Regulation of plasminogen activation pathway activity in LIVER (Pearson r = -0.65).

Pathway activity biomarkers of OF-1 response

Ranked by combined sampling and lineage consensus. X-score (response→biomarker) and Y-score (biomarker→response) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner pathwayX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LIVERRegulation of plasminogen activation →-0.374-1.250.003.01439
LIVERPyrimidine-containing compound transmembrane transport →+0.225+1.425.042.00139
LARGE_INTESTINEPurine nucleobase transport →+0.106+0.395.006.01839
URINARY_TRACTPositive regulation of extracellular matrix organization →-0.221-0.507.014.00738
BREASTRegulation of cell-substrate adhesion →-0.076-0.631.005.00138
SOFT_TISSUEPositive regulation of cell-substrate adhesion →-0.108-0.554.013.01229
Each biomarker links to its Q-omics profile. Showing the 6 strongest associations by consensus.

OF-1 response vs Regulation of plasminogen activation — LIVER

Per-cell-line scatter of OF-1 response vs Regulation of plasminogen activation pathway activity in LIVER.

Explore this scatter interactively →

Exploration