Idelalisib

response biomarkers — cross-omics
Drug responseDRUG → SHRNACell lineCAL-101, Zydelig

Across CCLE and GDSC cell-line panels, response to Idelalisib is significantly associated with the shRNA dependency of multiple gene dependencies, with UPPER_AERODIGESTIVE_TRACT cell lines showing a particularly strong set of associations.

The most reproducible Idelalisib response-associated gene dependencies across cancer lineages are ART3, CKAP5, and LRRFIP1, each associated with drug response in up to 7 lineages. Since the analysis identifies associations rather than directional relationships, both response-to-biomarker and biomarker-to-response views are provided.

Each biomarker is linked to its corresponding Q-omics profile. The scatter plot shows the strongest observed association, Idelalisib response versus ART3 shRNA dependency in UPPER_AERODIGESTIVE_TRACT (Pearson r = -0.96).

Shrna dependency biomarkers of Idelalisib response

Ranked by combined sampling and lineage consensus. X-score (response→biomarker) and Y-score (biomarker→response) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner gene dependencieX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UPPER_AERODIGESTIVE_TRACTART3 →-0.135-0.521.002.01237
CNSCKAP5 →-0.634-0.379.014.02137
CNSLRRFIP1 →+0.236+0.354.015.00636
LUNG_SCLCATP6AP2 →-0.227-0.615.001.00936
BLOOD_MyelomaAQP12B →-0.500-0.396.016.01636
LUNG_SCLCMAGEA6 →+0.211+0.598.011.01036
Each biomarker links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Idelalisib response vs ART3 — UPPER_AERODIGESTIVE_TRACT

Per-cell-line scatter of Idelalisib response vs ART3 shRNA dependency in UPPER_AERODIGESTIVE_TRACT.

Explore this scatter interactively →

Exploration