Bleomycin

response biomarkers — cross-omics
dsDNA break inductionDrug responseDRUG → FUNCTION-MSCell line

Across CCLE and GDSC cell-line panels, response to Bleomycin is significantly associated with the protein-level pathway activity of multiple pathways, with OVARY cell lines showing a particularly strong set of associations.

The most reproducible Bleomycin response-associated pathways across cancer lineages are Negative regulation of proteasomal protein catabolic process, Negative regulation of neuron apoptotic process, and Negative regulation of proteasomal ubiquitin-dependent protein catabolic process, each associated with drug response in up to 8 lineages. Since the analysis identifies associations rather than directional relationships, both response-to-biomarker and biomarker-to-response views are provided.

Each biomarker is linked to its corresponding Q-omics profile. The scatter plot shows the strongest observed association, Bleomycin response versus Negative regulation of proteasomal protein catabolic process protein-level pathway activity in OVARY (Pearson r = 0.30).

Protein-level pathway activity biomarkers of Bleomycin response

Ranked by combined sampling and lineage consensus. X-score (response→biomarker) and Y-score (biomarker→response) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner pathwayX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYNegative regulation of proteasomal protein catabolic process →+0.307+0.736.008.01338
BLOOD_LymphomaNegative regulation of neuron apoptotic process →-0.228-0.595.007<.00138
OVARYNegative regulation of proteasomal ubiquitin-dependent protein catabolic process →+0.293+0.654.011.02637
BONERegulation of protein processing →-0.356-0.672.014.00937
URINARY_TRACTCellular response to xenobiotic stimulus →-0.336-0.735.002.03637
BLOOD_LeukemiaRelaxation of cardiac muscle →-0.369-0.247.036.04237
Each biomarker links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Bleomycin response vs Negative regulation of proteasomal protein catabolic process — OVARY

Per-cell-line scatter of Bleomycin response vs Negative regulation of proteasomal protein catabolic process protein-level pathway activity in OVARY.

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Exploration