BIBR-1532

response biomarkers — cross-omics
Drug responseDRUG → SHRNACell line

Across CCLE and GDSC cell-line panels, response to BIBR-1532 is significantly associated with the shRNA dependency of multiple gene dependencies, with SOFT_TISSUE cell lines showing a particularly strong set of associations.

The most reproducible BIBR-1532 response-associated gene dependencies across cancer lineages are HSPE1-MOB4, GHRHR, and OR10A2, each associated with drug response in up to 9 lineages. Since the analysis identifies associations rather than directional relationships, both response-to-biomarker and biomarker-to-response views are provided.

Each biomarker is linked to its corresponding Q-omics profile. The scatter plot shows the strongest observed association, BIBR-1532 response versus HSPE1-MOB4 shRNA dependency in SOFT_TISSUE (Pearson r = 0.86).

Shrna dependency biomarkers of BIBR-1532 response

Ranked by combined sampling and lineage consensus. X-score (response→biomarker) and Y-score (biomarker→response) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner gene dependencieX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUEHSPE1-MOB4 →+0.630+0.756.036.00139
PANCREASGHRHR →-0.214-0.388.011.01237
UPPER_AERODIGESTIVE_TRACTOR10A2 →-0.150-0.302.043.02428
BLOOD_LymphomaMAP3K9 →+0.359+0.517.010.01537
CNSCCDC141 →+0.206+0.469.002.00437
CNSSLC22A7 →-0.164-0.515.007.01037
Each biomarker links to its Q-omics profile. Showing the 6 strongest associations by consensus.

BIBR-1532 response vs HSPE1-MOB4 — SOFT_TISSUE

Per-cell-line scatter of BIBR-1532 response vs HSPE1-MOB4 shRNA dependency in SOFT_TISSUE.

Explore this scatter interactively →

Exploration