BI-2536

response biomarkers — cross-omics
Drug responseDRUG → SHRNACell line

Across CCLE and GDSC cell-line panels, response to BI-2536 is significantly associated with the shRNA dependency of multiple gene dependencies, with BLOOD_Lymphoma cell lines showing a particularly strong set of associations.

The most reproducible BI-2536 response-associated gene dependencies across cancer lineages are UNC119, CHD2, and AGTR1, each associated with drug response in up to 8 lineages. Since the analysis identifies associations rather than directional relationships, both response-to-biomarker and biomarker-to-response views are provided.

Each biomarker is linked to its corresponding Q-omics profile. The scatter plot shows the strongest observed association, BI-2536 response versus UNC119 shRNA dependency in BLOOD_Lymphoma (Pearson r = -0.45).

Shrna dependency biomarkers of BI-2536 response

Ranked by combined sampling and lineage consensus. X-score (response→biomarker) and Y-score (biomarker→response) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner gene dependencieX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaUNC119 →-0.393-0.368.011.00438
OVARYCHD2 →+0.215+1.010.022.01338
PANCREASAGTR1 →+0.138+0.885.001.00338
URINARY_TRACTRNPS1 →+0.530+2.386.021.00838
CNSCTNNBL1 →+0.461+0.882.025.00537
LIVERRGPD4 →-0.243-1.469.028.01237
Each biomarker links to its Q-omics profile. Showing the 6 strongest associations by consensus.

BI-2536 response vs UNC119 — BLOOD_Lymphoma

Per-cell-line scatter of BI-2536 response vs UNC119 shRNA dependency in BLOOD_Lymphoma.

Explore this scatter interactively →

Exploration